TBLASTN 2.6.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dm6.32
31,089 sequences; 88,960,239 total letters
Query= sp|P08505|IL6_MOUSE Interleukin-6 OS=Mus musculus OX=10090 GN=Il6
PE=1 SV=1
Length=211
***** No hits found *****
Lambda K H a alpha
0.320 0.135 0.393 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2886574515
Query= sp|P05231|IL6_HUMAN Interleukin-6 OS=Homo sapiens OX=9606 GN=IL6
PE=1 SV=1
Length=212
Score E
Sequences producing significant alignments: (Bits) Value
FBtr0345011 cdna primary_assembly:BDGP6.32:2R:6972112:6973929:-... 31.6 0.95
FBtr0086185 cdna primary_assembly:BDGP6.32:2R:6972112:6975026:-... 31.6 0.96
FBtr0345802 cdna primary_assembly:BDGP6.32:2R:6971996:6975026:-... 31.6 0.97
FBtr0075330 cdna primary_assembly:BDGP6.32:3L:16845386:16852350... 30.4 2.8
FBtr0084645 cdna primary_assembly:BDGP6.32:3R:24530660:24536395... 29.3 5.9
FBtr0334335 cdna primary_assembly:BDGP6.32:3R:24530576:24536395... 29.3 5.9
> FBtr0345011 cdna primary_assembly:BDGP6.32:2R:6972112:6973929:-1
gene:FBgn0033121 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:Cyp6u1 description:Cyp6u1
Length=1760
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +1
Query 78 CESSKEALAENNLNLPKMAEKDGCFQSGFNEETCLVKIITGLLE 121
C+S K L+E+ N P A + GC SG ++ +GLLE
Sbjct 70 CKSRKRQLSEHGSNAPHPAHRPGCAVSGLRPG----QVQSGLLE 189
> FBtr0086185 cdna primary_assembly:BDGP6.32:2R:6972112:6975026:-1
gene:FBgn0033121 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:Cyp6u1 description:Cyp6u1
Length=1911
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +2
Query 78 CESSKEALAENNLNLPKMAEKDGCFQSGFNEETCLVKIITGLLE 121
C+S K L+E+ N P A + GC SG ++ +GLLE
Sbjct 221 CKSRKRQLSEHGSNAPHPAHRPGCAVSGLRPG----QVQSGLLE 340
> FBtr0345802 cdna primary_assembly:BDGP6.32:2R:6971996:6975026:-1
gene:FBgn0033121 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:Cyp6u1 description:Cyp6u1
Length=2027
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +2
Query 78 CESSKEALAENNLNLPKMAEKDGCFQSGFNEETCLVKIITGLLE 121
C+S K L+E+ N P A + GC SG ++ +GLLE
Sbjct 221 CKSRKRQLSEHGSNAPHPAHRPGCAVSGLRPG----QVQSGLLE 340
> FBtr0075330 cdna primary_assembly:BDGP6.32:3L:16845386:16852350:1
gene:FBgn0036668 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:Zcchc7 description:Zinc
finger CCHC-type containing 7
Length=5454
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/48 (40%), Positives = 25/48 (52%), Gaps = 0/48 (0%)
Frame = +2
Query 51 ERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEK 98
+RID IR++ DGI++L N + KE N N KMAEK
Sbjct 4208 KRIDVLIRFLRDGINSLNTNLGNAKSHYVRIKELEGMNTKNGFKMAEK 4351
> FBtr0084645 cdna primary_assembly:BDGP6.32:3R:24530660:24536395:1
gene:FBgn0262167 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:ana1 description:anastral
spindle 1
Length=5526
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (46%), Gaps = 14/85 (16%)
Frame = +1
Query 39 VAAPHRQPLTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNL------ 92
V A HR +ERI++Q + +D I RK+ +S ++S E N +NL
Sbjct 424 VGAAHRAAKEENERIEQQRQERIDKIRRCRKQALKRS--AKASVELRTTNTMNLNAEGRA 597
Query 93 ------PKMAEKDGCFQSGFNEETC 111
P + +K+ +SG N+ C
Sbjct 598 SAGTQTPIVEDKENRMESGCNKPCC 672
> FBtr0334335 cdna primary_assembly:BDGP6.32:3R:24530576:24536395:1
gene:FBgn0262167 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:ana1 description:anastral
spindle 1
Length=5610
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (46%), Gaps = 14/85 (16%)
Frame = +1
Query 39 VAAPHRQPLTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNL------ 92
V A HR +ERI++Q + +D I RK+ +S ++S E N +NL
Sbjct 508 VGAAHRAAKEENERIEQQRQERIDKIRRCRKQALKRS--AKASVELRTTNTMNLNAEGRA 681
Query 93 ------PKMAEKDGCFQSGFNEETC 111
P + +K+ +SG N+ C
Sbjct 682 SAGTQTPIVEDKENRMESGCNKPCC 756
Lambda K H a alpha
0.315 0.127 0.349 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2913056850
Query= sp|Q0GGL7|IL6_ONCMY Interleukin-6 OS=Oncorhynchus mykiss OX=8022
GN=il6 PE=2 SV=1
Length=219
Score E
Sequences producing significant alignments: (Bits) Value
FBtr0075282 cdna primary_assembly:BDGP6.32:3L:17049512:17055454... 29.3 5.0
FBtr0075283 cdna primary_assembly:BDGP6.32:3L:17051277:17055454... 29.3 5.0
FBtr0332684 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-... 29.3 7.0
FBtr0332681 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-... 29.3 7.0
FBtr0332679 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-... 29.3 7.0
FBtr0332680 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-... 29.3 7.0
FBtr0332678 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-... 29.3 7.0
FBtr0332682 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-... 29.3 7.0
FBtr0332676 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-... 29.3 7.0
FBtr0332675 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-... 29.3 7.0
FBtr0332674 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-... 29.3 7.0
FBtr0332683 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-... 28.9 7.4
FBtr0332677 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-... 28.9 8.7
> FBtr0075282 cdna primary_assembly:BDGP6.32:3L:17049512:17055454:1
gene:FBgn0036697 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:rogdi description:rogdi
Length=2335
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (3%)
Frame = +3
Query 166 LSASERKRVLGEVSTGTEWERKTSVHAILRELRNFLVD 203
L+ +ER+ L + EW + VHAIL++LR+ LV+
Sbjct 450 LADTEREEALN-LQIEFEWVLRQEVHAILKQLRSILVE 560
> FBtr0075283 cdna primary_assembly:BDGP6.32:3L:17051277:17055454:1
gene:FBgn0036697 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:rogdi description:rogdi
Length=2028
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (3%)
Frame = +2
Query 166 LSASERKRVLGEVSTGTEWERKTSVHAILRELRNFLVD 203
L+ +ER+ L + EW + VHAIL++LR+ LV+
Sbjct 143 LADTEREEALN-LQIEFEWVLRQEVHAILKQLRSILVE 253
> FBtr0332684 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-1
gene:FBgn0086906 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:sls description:sallimus
Length=46550
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +1
Query 102 LCSASNKEACLQEISRGLQVYQLLLQHVKAEYPQSTLLPSVTHQTTVLIGLVKD 155
L + KE +E++ L ++L + V EYP + L+P T IG +KD
Sbjct 36940 LKPSKRKEKPAEELTVQLPKFRLKARMVLVEYPPAPLIPKTTD-----IGAIKD 37086
> FBtr0332681 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-1
gene:FBgn0086906 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:sls description:sallimus
Length=47519
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +1
Query 102 LCSASNKEACLQEISRGLQVYQLLLQHVKAEYPQSTLLPSVTHQTTVLIGLVKD 155
L + KE +E++ L ++L + V EYP + L+P T IG +KD
Sbjct 36940 LKPSKRKEKPAEELTVQLPKFRLKARMVLVEYPPAPLIPKTTD-----IGAIKD 37086
> FBtr0332679 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-1
gene:FBgn0086906 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:sls description:sallimus
Length=48944
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +1
Query 102 LCSASNKEACLQEISRGLQVYQLLLQHVKAEYPQSTLLPSVTHQTTVLIGLVKD 155
L + KE +E++ L ++L + V EYP + L+P T IG +KD
Sbjct 38365 LKPSKRKEKPAEELTVQLPKFRLKARMVLVEYPPAPLIPKTTD-----IGAIKD 38511
> FBtr0332680 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-1
gene:FBgn0086906 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:sls description:sallimus
Length=49523
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +1
Query 102 LCSASNKEACLQEISRGLQVYQLLLQHVKAEYPQSTLLPSVTHQTTVLIGLVKD 155
L + KE +E++ L ++L + V EYP + L+P T IG +KD
Sbjct 38944 LKPSKRKEKPAEELTVQLPKFRLKARMVLVEYPPAPLIPKTTD-----IGAIKD 39090
> FBtr0332678 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-1
gene:FBgn0086906 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:sls description:sallimus
Length=55136
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +1
Query 102 LCSASNKEACLQEISRGLQVYQLLLQHVKAEYPQSTLLPSVTHQTTVLIGLVKD 155
L + KE +E++ L ++L + V EYP + L+P T IG +KD
Sbjct 44557 LKPSKRKEKPAEELTVQLPKFRLKARMVLVEYPPAPLIPKTTD-----IGAIKD 44703
> FBtr0332682 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-1
gene:FBgn0086906 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:sls description:sallimus
Length=55178
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +1
Query 102 LCSASNKEACLQEISRGLQVYQLLLQHVKAEYPQSTLLPSVTHQTTVLIGLVKD 155
L + KE +E++ L ++L + V EYP + L+P T IG +KD
Sbjct 44599 LKPSKRKEKPAEELTVQLPKFRLKARMVLVEYPPAPLIPKTTD-----IGAIKD 44745
> FBtr0332676 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-1
gene:FBgn0086906 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:sls description:sallimus
Length=55436
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +1
Query 102 LCSASNKEACLQEISRGLQVYQLLLQHVKAEYPQSTLLPSVTHQTTVLIGLVKD 155
L + KE +E++ L ++L + V EYP + L+P T IG +KD
Sbjct 45826 LKPSKRKEKPAEELTVQLPKFRLKARMVLVEYPPAPLIPKTTD-----IGAIKD 45972
> FBtr0332675 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-1
gene:FBgn0086906 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:sls description:sallimus
Length=56405
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +1
Query 102 LCSASNKEACLQEISRGLQVYQLLLQHVKAEYPQSTLLPSVTHQTTVLIGLVKD 155
L + KE +E++ L ++L + V EYP + L+P T IG +KD
Sbjct 45826 LKPSKRKEKPAEELTVQLPKFRLKARMVLVEYPPAPLIPKTTD-----IGAIKD 45972
> FBtr0332674 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-1
gene:FBgn0086906 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:sls description:sallimus
Length=56489
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +1
Query 102 LCSASNKEACLQEISRGLQVYQLLLQHVKAEYPQSTLLPSVTHQTTVLIGLVKD 155
L + KE +E++ L ++L + V EYP + L+P T IG +KD
Sbjct 45889 LKPSKRKEKPAEELTVQLPKFRLKARMVLVEYPPAPLIPKTTD-----IGAIKD 46035
> FBtr0332683 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-1
gene:FBgn0086906 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:sls description:sallimus
Length=32960
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (52%), Gaps = 5/64 (8%)
Frame = +1
Query 102 LCSASNKEACLQEISRGLQVYQLLLQHVKAEYPQSTLLPSVTHQTTVLIGLVKDQMKVAE 161
L + KE +E++ L ++L + V EYP + L+P T IG +KD +++
Sbjct 22381 LKPSKRKEKPAEELTVQLPKFRLKARMVLVEYPPAPLIPKTTD-----IGAIKDNGELSR 22545
Query 162 VVED 165
+E+
Sbjct 22546 NIEE 22557
> FBtr0332677 cdna primary_assembly:BDGP6.32:3L:2039681:2115611:-1
gene:FBgn0086906 gene_biotype:protein_coding transcript_biotype:protein_coding
gene_symbol:sls description:sallimus
Length=47528
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +1
Query 102 LCSASNKEACLQEISRGLQVYQLLLQHVKAEYPQSTLLPSVTHQTTVLIGLVKD 155
L + KE +E++ L ++L + V EYP + L+P T IG +KD
Sbjct 36949 LKPSKRKEKPAEELTVQLPKFRLKARMVLVEYPPAPLIPKTTD-----IGAIKD 37095
Lambda K H a alpha
0.313 0.128 0.361 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3098433195
Database: Dm6.32
Posted date: Feb 21, 2022 12:31 PM
Number of letters in database: 88,960,239
Number of sequences in database: 31,089
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40