- Links for Classroom Practice -

Lecture 13 (3/18)

A. Observe DEGs identified by CuffDiff

  1. Link to HiPerGator with Globus , navigate to your CuffDiff results folder (Wholegut_aging).
  2. Download the "gene_exp.diff" file to the corresponding folder on your laptop.
  3. Open the file in MS Excel and save as a .xlxs workbook file.
  4. Extract significant DEGs(differentially expressed genes) with q less than 0.01.
  5. separate genes increased in old guts from those decreased.

B.) Functional interpretation of HTS (RNA-Seq) data

Links used for previous classes.